ncRNA ID | novel_zma_miR12370 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:96638752-96638832 [-] |
Reference genome | RefGen_v4 |
Source | SRR5105961 |
Length | 24 |
Mature sequence(if miRNA) | 58 - AUUACCGAGAGCAGGACUUUGCCG - 81 |
Stem-loop(if miRNA) |
--       A   - A  -A             --   A  CG   AUUACCG GAG C GG  CUUUGCCGAGUGC  GGC CU  A   ||||||| ||| | ||  |||||||||||||  ||| ||   UGAUGGC CUU G CC  GAAACGGCUCACG  CCG GA  U AG       -   A G  CG             AG   C  AA |
Stem-loop sequence | AUUACCGAGAGCAGGACUUUGCCGAGUGCGGCACUCGAUAAAGCGCCGAGCACUCGGCAAAGGCCCGGAUUCCGGUAGUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LQ241984.1 |
|
2.5 | Sequence 7979 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
HI409854.1 |
|
2.5 | Sequence 7979 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
JB170315.1 |
|
2.5 | Sequence 7979 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
XM_008658185.2 |
|
2.5 | PREDICTED: Zea mays putative F-box/LRR-repeat protein At3g58880 (LOC103635804), mRNA | NA | coding protein | psRNATarget |