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BaseInfo

ncRNA ID novel_zma_miR12367
Species Zea mays
Class miRNA
Genome position Chr7:144090418-144090515 [-]
Reference genome RefGen_v4
Source SRR5105961
Length 24
Mature sequence(if miRNA) 75 - AUGAGAUGGACUGACCUAUGGGGG - 98
Stem-loop(if miRNA) --     AU  A   -A       G G      ----     -GUAG     G
  AUGAG  GG CUG  CCUAUGG G CGGAUC    CUCGU     GGGCU G
  |||||  || |||  ||||||| | ||||||    |||||     ||||| G
  UACUC  CC GAC  GGAUAUC C GCCUAG    GAGCA     CUCGG A
CG     --  A   GG       - G      AAAU     AGAAA     G
Stem-loop sequence AUGAGAUGGACUGACCUAUGGGGGCGGAUCCUCGUGUAGGGGCUGGGAGGGCUCAAAGAACGAGUAAAGAUCCGGCCUAUAGGGGCAGACCCUCAUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020549459.1
ncRNA:24   GGGGGUAUCCAGUCAGGUAGAGUA   1
  =|||||||||||||||||||||||
targets:4774   UCCCCAUAGGUCAGUCCAUCUCAU   4797

0.0 PREDICTED: Zea mays uncharacterized LOC100192909 (pco096800), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020539261.1
ncRNA:24   GGGGGUAUCCAGUCAGGUAGAGUA   1
  ||||=||||*||||||||||||=|
targets:373   CCCCUAUAGAUCAGUCCAUCUCGU   396

2.5 PREDICTED: Zea mays uncharacterized LOC103629447 (LOC103629447), mRNA NA coding protein psRNATarget