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BaseInfo

ncRNA ID novel_zma_miR12364
Species Zea mays
Class miRNA
Genome position Chr7:170564557-170564633 [-]
Reference genome RefGen_v4
Source SRR5105961
Length 24
Mature sequence(if miRNA) 54 - AGGGGGAUUGUAGAGGUUUAAAUC - 77
Stem-loop(if miRNA) --A         U  A          C          A
   GGGGGAUUG AG GGUUUAAAUC CCUCCUAGUC U
   ||||||||| || |||||||||| |||||||||| U
   UCUCCUAAC UC CUAAAUUUAG GGAGGAUCAG U
UGC         C  C          A          U
Stem-loop sequence AGGGGGAUUGUAGAGGUUUAAAUCCCCUCCUAGUCAUUUUGACUAGGAGGAGAUUUAAAUCCCUCCAAUCCUCUCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020540164.1
ncRNA:24   CUAAAUUUGGAGAUGUUAGGGGGA   1
  ||||||||||*||*||||||||||
targets:1597   GAUUUAAACCCCUCCAAUCCCCCU   1620

2.5 PREDICTED: Zea mays Cysteine-rich repeat secretory protein 3 (LOC107521955), transcript variant X1, mRNA NA coding protein psRNATarget
BT061531.2
ncRNA:24   CUAAAUUUGGAGAUGUUAGGGGGA   1
  ||||*|||||*||*||||||||||
targets:836   GAUUAAAACCCCUUCAAUCCCCCU   859

2.5 Zea mays full-length cDNA clone ZM_BFb0155L17 mRNA, complete cds NA coding protein psRNATarget