ncRNA ID | novel_zma_miR12358 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:59035897-59036111 [+] |
Reference genome | RefGen_v4 |
Source | SRR5105961 |
Length | 21 |
Mature sequence(if miRNA) | 195 - CGGAUCUCUAUUGUGGUUGCU - 215 |
Stem-loop(if miRNA) |
U   -UGA       -    -   CG     AAGG  U      UAG  CUUAUAU  UCGACCGUGGGGCAAUACAUGUGGAUAUGAUAACAACGUGUAACUAAAAGAUA  GGC    GUAAUAG GAUC GAU  UUCUG    GG GCCCCC   GC       AC                                                     G  |||    ||||||| |||| |||  |||||    || ||||||   ||       ||  UCG    UGUUAUC CUAG CUG  AGGGC    CC CGGGGG   CG       CC                                                     U -   UUGG       U    G   AA     GCGA  U      -UA  ----UUG  CCGGUACACUCCUAUCCAGCCGCCUUGAUAUCUCUCUAUUUUAGUUUGUAAAG |
Stem-loop sequence | UGGCUGAGUAAUAGGAUCGAUCGUUCUGAAGGGGUGCCCCCUAGGCCUUAUAUACUCGACCGUGGGGCAAUACAUGUGGAUAUGAUAACAACGUGUAACUAAAAGAUAGUGAAAUGUUUGAUUUUAUCUCUCUAUAGUUCCGCCGACCUAUCCUCACAUGGCCCCGUUGCAUGGGGGCUCCAGCGCGGGAAAGUCGGAUCUCUAUUGUGGUUGCU |