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BaseInfo

ncRNA ID osa-miRf10832-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - AUACCCGGUUUUGUAGUUCGGGGG - NA
Stem-loop(if miRNA)                                     ACA      AAUCUGGGGGGUUAAGU
UAAAAUACACCCCUGAACUACAAAACCGGGUAUAAU   CCCUCA                 G
||||||||||||||||||||||||||||||||||||   ||||||                 U
GUUUUAUGUGGGGGCUUGAUGUUUUGGCCCAUAUUA   UACGGG                 C
                                    ---      AGCUUGAAAGUUAUGGC
Stem-loop sequence UAAAAUACACCCCUGAACUACAAAACCGGGUAUAAUACACCCUCAAAUCUGGGGGGUUAAGUGUCCGGUAUUGAAAGUUCGAGGGCAUAUUAUACCCGGUUUUGUAGUUCGGGGGUGUAUUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015790305.1
ncRNA:24   GGGGGCUUGAUGUUUUGGCCCAUA   1
  ||||||||||||||||||||*|||
targets:875   CCCCCGAACUACAAAACCGGAUAU   898

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281545 (LOC107281545), transcript variant X1, mRNA uncharacterized LOC107281545(LOC107281545) coding protein psRNATarget
XM_015785681.1
ncRNA:24   GGGGGCUUGAUGUUUUGGCCCAUA   1
  ||||=*||||=|||||||||||||
targets:1255   CCCCUCAACUGCAAAACCGGGUAU   1278

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271654 (LOC9271654), transcript variant X1, mRNA uncharacterized LOC9271654(LOC9271654) coding protein psRNATarget
AK068382.1
ncRNA:24   GGGGGCUUGAUGUUUUGGCCCAUA   1
  =|||=*|||||=||||||||||||
targets:1678   UCCCUAAACUAUAAAACCGGGUAU   1701

2.5 Oryza sativa Japonica Group cDNA clone:J013144G21, full insert sequence NA coding protein psRNATarget
AK107850.1
ncRNA:24   GGGGGCUUGAUGUUUUGGCCCAUA   1
  *|||=*||||||||||||||*|||
targets:945   ACCCUAAACUACAAAACCGGAUAU   968

2.5 Oryza sativa Japonica Group cDNA clone:002-134-A08, full insert sequence NA coding protein psRNATarget