ncRNA ID | osa-miRf10832-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 24 |
Mature sequence(if miRNA) | NA - AUACCCGGUUUUGUAGUUCGGGGG - NA |
Stem-loop(if miRNA) |
                                    ACA      AAUCUGGGGGGUUAAGU UAAAAUACACCCCUGAACUACAAAACCGGGUAUAAU   CCCUCA                 G ||||||||||||||||||||||||||||||||||||   ||||||                 U GUUUUAUGUGGGGGCUUGAUGUUUUGGCCCAUAUUA   UACGGG                 C                                     ---      AGCUUGAAAGUUAUGGC |
Stem-loop sequence | UAAAAUACACCCCUGAACUACAAAACCGGGUAUAAUACACCCUCAAAUCUGGGGGGUUAAGUGUCCGGUAUUGAAAGUUCGAGGGCAUAUUAUACCCGGUUUUGUAGUUCGGGGGUGUAUUUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015790305.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281545 (LOC107281545), transcript variant X1, mRNA | uncharacterized LOC107281545(LOC107281545) | coding protein | psRNATarget | |||||||||
XM_015785681.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271654 (LOC9271654), transcript variant X1, mRNA | uncharacterized LOC9271654(LOC9271654) | coding protein | psRNATarget | |||||||||
AK068382.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013144G21, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK107850.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-134-A08, full insert sequence | NA | coding protein | psRNATarget |