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BaseInfo

ncRNA ID novel_zma_miR12338
Species Zea mays
Class miRNA
Genome position Chr1:287450531-287450580 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 27 - AUCGGGUCUGGCGGGGACGGGUAU - 50
Stem-loop(if miRNA) --      UCU        --C     
  AUCGGG   GGCGGGGA   GGGUAU
  ||||||   ||||||||   |||||G
  UAGCCC   UUGCCCCU   CCCAUG
CA      ---        UAU     
Stem-loop sequence AUCGGGUCUGGCGGGGACGGGUAUGGUACCCUAUUCCCCGUUCCCGAUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT018973.1
ncRNA:24   UAUG------GGCAGGGGCGGUCUGGGCUA   1
  ||=|------|||*||||||||||||||*|
targets:358   AUGCGCCUCUCCGACCCCGCCAGACCCGUU   387

2.5 Zea mays clone Contig385.F mRNA sequence NA coding protein psRNATarget