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BaseInfo

ncRNA ID ath-miRf10131-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - UACUCGACCUCUAGGUCGAGUGGU - NA
Stem-loop(if miRNA)   G   U -UU                        UCU   G  
GU GUG C   CUACUCGGCCUAGGGGUCGAGUGG   CUU AGA
|| ||| |   ||||||||||||||||||||||||   ||| ||U
UA UAC G   GGUGAGCUGGAUCUCCAGCUCAUC   GAA UUC
  G   U UUU                        CUC   G  
Stem-loop sequence GUGGUGUCUUCUACUCGGCCUAGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUAGGUCGAGUGGUUUGUCAUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY227642.1
ncRNA:24   UGGUGAGCUGGAUCUCCAGCUCAU   1
  *=|||||*||||||||||||||||
targets:925   CUCACUCUACCUAGAGGUCGAGUA   948

1.0 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
AY227642.1
ncRNA:24   UGGUGAGCUGGAUCUCCAGCUCAU   1
  |||||||||||*||||||||||||
targets:762   ACCACUCGACCCAGAGGUCGAGUA   785

1.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183042.1
ncRNA:24   UGGUGAGCUGGAUCUCCAGCUCAU   1
  |=|||||*|||||||*||||||||
targets:1733   AUCACUCUACCUAGAAGUCGAGUA   1756

2.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183005.1
ncRNA:24   UGGUGAGCUGGAUCUCCAGCUCAU   1
  =*||||||||||*||||||||||=
targets:1863   GGCACUCGACCUCGAGGUCGAGUG   1886

2.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget