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BaseInfo

ncRNA ID	novel_zma_miR12323
Species	Zea mays
Class	miRNA
Genome position	Chr5:175970617-175970702 [-]
Reference genome	RefGen_v4
Source	SRR5105961
Length	21
Mature sequence(if miRNA)	66 - AAUGAAGAGGAUUGAGGGUGC - 86
Stem-loop(if miRNA)	--    AA            U        -   U         A   AAUG  GAGGAUUGAGGG GCUAGAAU CUC CACUAUUUA A   ||||  |||||||||||| |||||||| ||| |||||||||   UUAU  CUCCUAACUUCC CGAUCUUA GAG GUGAUAAGU A AA    CC            C        U   -         U
Stem-loop sequence	AAUGAAGAGGAUUGAGGGUGCUAGAAUCUCUCACUAUUUAAAAUUGAAUAGUGGAGUAUUCUAGCCCCUUCAAUCCUCCCUAUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166488.1	ncRNA:21   CGUGGGAGUUAGGAGAAGUAA   1   ||*||||||||||*||||||| targets:88   GCCCCCUCAAUCCCCUUCAUU   108 Target Full Sequence	2.5	Sequence 4152 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238157.1	ncRNA:21   CGUGGGAGUUAGGAGAAGUAA   1   ||*||||||||||*||||||| targets:88   GCCCCCUCAAUCCCCUUCAUU   108 Target Full Sequence	2.5	Sequence 4152 from Patent EP2985353	NA	coding protein	psRNATarget
HI406027.1	ncRNA:21   CGUGGGAGUUAGGAGAAGUAA   1   ||*||||||||||*||||||| targets:88   GCCCCCUCAAUCCCCUUCAUU   108 Target Full Sequence	2.5	Sequence 4152 from Patent EP2074227	NA	coding protein	psRNATarget
BT062966.1	ncRNA:21   CGUGGGAGUUAGGAGAAGUAA   1   ||*||||||||||*||||||| targets:2624   GCCCCCUCAAUCCCCUUCAUU   2644 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0013E16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174804.1	ncRNA:21   CGUGGGAGUUAGGAGAAGUAA   1   ||*||||||||||*||||||| targets:2624   GCCCCCUCAAUCCCCUUCAUU   2644 Target Full Sequence	2.5	Zea mays Eukaryotic translation initiation factor isoform 4G-2 (umc1280), mRNA	NA	coding protein	psRNATarget
XM_008663899.2	ncRNA:21   CGUGGGAGUUAGGAGAAGUAA   1   ||*||||||||||*||||||| targets:2712   GCCCCCUCAAUCCCCUUCAUU   2732 Target Full Sequence	2.5	PREDICTED: Zea mays Eukaryotic translation initiation factor isoform 4G-2 (umc1280), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT084736.2	ncRNA:21   CGUGGGAGUUAGGAGAAGUAA   1   **|=||||||||||||||*|| targets:428   AGAUCCUCAAUCCUCUUCUUU   448 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0168K04 mRNA, complete cds	NA	coding protein	psRNATarget