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BaseInfo

ncRNA ID novel_zma_miR12313
Species Zea mays
Class miRNA
Genome position Chr5:14201385-14201484 [+]
Reference genome RefGen_v4
Source SRR5105961
Length 24
Mature sequence(if miRNA) 77 - AAUGUCUGUGGCACUCGGCAAAGA - 100
Stem-loop(if miRNA) --              -    C  A                 AAG   U G
  UUUGUCGAGUGUCA AGAC AU GCACUCGGCAAAGAACC   ACC G G
  |||||||||||||| |||| || |||||||||||||||||   ||| |
  AAACGGCUCACGGU UCUG UA UGUGAGCCGUUUCUUGG   UGG C C
AG              G    -  A                 AUA   C A
Stem-loop sequence UUUGUCGAGUGUCAAGACCAUAGCACUCGGCAAAGAACCAAGACCUGGGCACCGGUAUAGGUUCUUUGCCGAGUGUAAUGUCUGUGGCACUCGGCAAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ238769.1
ncRNA:24   AGAAACGGCUCACGGUGUCUGUAA   1
  ||||||||||||||||=|||||||
targets:170   UCUUUGCCGAGUGCCAUAGACAUU   193

1.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
JB167100.1
ncRNA:24   AGAAACGGCUCACGGUGUCUGUAA   1
  ||||||||||||||||=|||||||
targets:170   UCUUUGCCGAGUGCCAUAGACAUU   193

1.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
HI406639.1
ncRNA:24   AGAAACGGCUCACGGUGUCUGUAA   1
  ||||||||||||||||=|||||||
targets:170   UCUUUGCCGAGUGCCAUAGACAUU   193

1.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget