ncRNA ID | novel_zma_miR12309 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:63840900-63841026 [+] |
Reference genome | RefGen_v4 |
Source | SRR5105961 |
Length | 24 |
Mature sequence(if miRNA) | 104 - AAUUUCGCACGAGCACAUGCCUUG - 127 |
Stem-loop(if miRNA) |
-   A              U                 - CC         C        U   U  AAG CAUGUGCUCGUGCG AGUUUCGGCAGCAUAAC C  UUUGUUCUC AAUUGCAC AUU U  ||| |||||||||||||| ||||||||||||||||| |  ||||||||| |||||||| |||  UUC GUACACGAGCACGC UUAAAGCCGUUGUAUUG G  GGACAAGAG UUAACGUG UAG C G   C              U                 A AC         A        -   A |
Stem-loop sequence | AAGACAUGUGCUCGUGCGUAGUUUCGGCAGCAUAACCCCUUUGUUCUCCAAUUGCACUAUUUUCAGAUGUGCAAUUAGAGAACAGGCAGAGUUAUGUUGCCGAAAUUUCGCACGAGCACAUGCCUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT085515.1 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFc0028G11 mRNA, complete cds | NA | coding protein | psRNATarget |