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BaseInfo

ncRNA ID novel_zma_miR12308
Species Zea mays
Class miRNA
Genome position Chr4:63840176-63840302 [+]
Reference genome RefGen_v4
Source SRR5105961
Length 24
Mature sequence(if miRNA) 104 - AAUUUCGCACGAGCACAUGCCUUG - 127
Stem-loop(if miRNA) -   A              U       U         - CA        CC        U   U
 AAG CAUGUGCUCGUGCG AGUUUCG CAGCAUAAC C  UUUGUUCU  AAUUGCAC AUU U
 ||| |||||||||||||| ||||||| ||||||||| |  ||||||||  |||||||| |||
 UUC GUACACGAGCACGC UUAAAGC GUUGUAUUG G  AGACAAGA  UUAACGUG UAG C
G   C              U       C         A AC        AA        -   A
Stem-loop sequence AAGACAUGUGCUCGUGCGUAGUUUCGUCAGCAUAACCCAUUUGUUCUCCAAUUGCACUAUUUUCAGAUGUGCAAUUAAAGAACAGACAGAGUUAUGUUGCCGAAAUUUCGCACGAGCACAUGCCUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT085515.1
ncRNA:24   GUUCCGUACACGAGCACGCUUUAA   1
  |||||||||||||||||||=||||
targets:1578   CAAGGCAUGUGCUCGUGCGGAAUU   1601

1.5 Zea mays full-length cDNA clone ZM_BFc0028G11 mRNA, complete cds NA coding protein psRNATarget