ncRNA ID | novel_zma_miR12307 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:16374792-16374954 [-] |
Reference genome | RefGen_v4 |
Source | SRR5105961 |
Length | 24 |
Mature sequence(if miRNA) | 140 - AGGAGGCCGUAGGAAGUUAGCUAC - 163 |
Stem-loop(if miRNA) |
--   A                 UACCCAU            GU   AG AG   A            U   --   C ACA   AGG GGCCGUAGGAAGUUAGC       GCUAACUUCCUA  GUC  C  UAG AAGUUAGCUUUU GUU  UGA C   A   ||| |||||||||||||||||       ||||||||||||  |||  |  ||| |||||||||||| |||  ||| |   C   UCC UCGGCAUCCUUCAAUCG       CGAUUGAAGGAU  CGG  G  AUC UUCAAUCGAAAA CAA  ACU G   C UC   G                 UACCAGU            AC   AG AG   C            U   CG   A ACG |
Stem-loop sequence | AGGAGGCCGUAGGAAGUUAGCUACCCAUGCUAACUUCCUAGUGUCAGCAGUAGAAAGUUAGCUUUUUGUUUGACCACAACCGCAGAUCAGCAACUAAAAGCUAACUUCCUAGAGGAGGCCAUAGGAAGUUAGCUGACCAUGCUAACUUCCUACGGCUGCCUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT086229.2 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds | NA | coding protein | psRNATarget |