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BaseInfo

ncRNA ID novel_zma_miR12304
Species Zea mays
Class miRNA
Genome position Chr4:35647830-35647962 [-]
Reference genome RefGen_v4
Source SRR5105961
Length 24
Mature sequence(if miRNA) 1 - ACGGUCCGCGACCUAGUGCAGGAG - 24
Stem-loop(if miRNA) -C       -   -G      G      G G GGG G -     G       G      GC   -   G
  UCUGCAC AGG  GCGGAC GUCCGG C C   G C CGGAC GUCCGCG CCUGGC  GAG GCG C
  ||||||| |||  |||||| |||||| | |   | | ||||| ||||||| ||||||  ||| |||
  GGACGUG UCC  CGCCUG CAGGCC G G   C G GCCUG CAGGCGC GGACUG  CUC CGU G
GA       A   AG      G      G - ACA G C     G       -      GU   U   G
Stem-loop sequence CUCUGCACAGGGGCGGACGGUCCGGGCGCGGGGGCCGGACGGUCCGCGGCCUGGCGCGAGGCGGCGGUGCUCUCUGGUCAGGCGCGGACGGUCCGCGGCACAGGGCCGGACGGUCCGCGACCUAGUGCAGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   GAGGACGUGAUCCAGCGCCUGGCA   1
  *||--||==*||||||||||||||
targets:58   GUC--GCGUCAGGUCGCGGACCGU   79

3.0 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget