Search result

BaseInfo

ncRNA ID	novel_zma_miR12302
Species	Zea mays
Class	miRNA
Genome position	Chr4:47107368-47107480 [-]
Reference genome	RefGen_v4
Source	SRR5105961
Length	21
Mature sequence(if miRNA)	1 - UAACAUAUGAUGAAUUUGAAC - 21
Stem-loop(if miRNA)	--                          CA            A     U    UU U   UUAAAUUCAUCAUAUGUUAAGAGAUA  AAAAAGAGAAAA UCUGA AUAA  U C   ||||||||||||||||||||||||||  |||||||||||| ||||| ||||  | A   AGUUUAAGUAGUAUACAAUUCUCUAU  UUUUUCUCUUUU AGACU UAUU  A C CA                          --            A     C    UU U
Stem-loop sequence	UUAAAUUCAUCAUAUGUUAAGAGAUACAAAAAAGAGAAAAAUCUGAUAUAAUUUUCACUAUUUUAUCUCAGAAUUUUCUCUUUUUUAUCUCUUAACAUAUGAUGAAUUUGAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008669948.2	ncRNA:21   CAAGUUUAAGUAGUAUACAAU   1   ||||*|||||||||||||||| targets:1986   GUUCUAAUUCAUCAUAUGUUA   2006 Target Full Sequence	1.0	PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008669949.2	ncRNA:21   CAAGUUUAAGUAGUAUACAAU   1   ||||*|||||||||||||||| targets:1971   GUUCUAAUUCAUCAUAUGUUA   1991 Target Full Sequence	1.0	PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT083857.2	ncRNA:21   CAAGUUUAAGUAGUAUACAAU   1   *||||||||||||||||*||| targets:771   UUUCAAAUUCAUCAUAUAUUA   791 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0047M17 mRNA, complete cds	NA	coding protein	psRNATarget