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BaseInfo

ncRNA ID novel_zma_miR12293
Species Zea mays
Class miRNA
Genome position Chr4:147071080-147071127 [-]
Reference genome RefGen_v4
Source SRR5105961
Length 21
Mature sequence(if miRNA) 28 - CUUAUCUUCGCCUGGUUCCGU - 48
Stem-loop(if miRNA) --   A   U   -    --U    U
  CUU UCU CGC CUGG   UCCG C
  ||| ||| ||| ||||   |||| G
  GAA AGG GCG GACC   GGGC U
CU   -   -   C    UCG    A
Stem-loop sequence CUUAUCUUCGCCUGGUUCCGUCGUACGGGGCUCCAGCGCGGGAAAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY110556.1
ncRNA:21   UGCCUUGGUCCGCUUCUAUUC   1
  *=||||*||||||*|||||||
targets:46   CUGGAAGCAGGCGUAGAUAAG   66

2.5 Zea mays CL11258_1 mRNA sequence NA coding protein psRNATarget