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BaseInfo

ncRNA ID novel_zma_miR12292
Species Zea mays
Class miRNA
Genome position Chr4:147083935-147083982 [-]
Reference genome RefGen_v4
Source SRR5105961
Length 21
Mature sequence(if miRNA) 28 - CUUAUCUUCGCCUGGUUCCGU - 48
Stem-loop(if miRNA) CUUAUC     -    --U    U
      UUCGC CUGG   UCCG C
      ||||| ||||   |||| G
      AGGCG GACC   GGGC U
CUGAAA     C    UCG    A
Stem-loop sequence CUUAUCUUCGCCUGGUUCCGUCGUACGGGGCUCCAGCGCGGAAAAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY110556.1
ncRNA:21   UGCCUUGGUCCGCUUCUAUUC   1
  *=||||*||||||*|||||||
targets:46   CUGGAAGCAGGCGUAGAUAAG   66

2.5 Zea mays CL11258_1 mRNA sequence NA coding protein psRNATarget