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BaseInfo

ncRNA ID	novel_zma_miR12290
Species	Zea mays
Class	miRNA
Genome position	Chr7:41468785-41468870 [-]
Reference genome	RefGen_v4
Source	SRR5105959
Length	24
Mature sequence(if miRNA)	63 - UCGUUCCUUGUAUGCCACUGGCCC - 86
Stem-loop(if miRNA)	--           A         CCCCACA    AUAGACACAA   UCGUUCCUUGU UGCCACUGG       UGUC          A   ||||||||||| |||||||||       ||||   AGUAAGGAACA ACGGUGACU       UAUA          A UG           C         --CACCG    UCCAUAUAAA
Stem-loop sequence	UCGUUCCUUGUAUGCCACUGGCCCCACAUGUCAUAGACACAAAAAAAUAUACCUAUAUGCCACUCAGUGGCACACAAGGAAUGAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU956996.1	ncRNA:24   CCCGGUCACCGUAUGUUCCUUGCU   1   |||||||||||||||||||||=|| targets:1626   GGGCCAGUGGCAUACAAGGAAUGA   1649 Target Full Sequence	1.5	Zea mays clone 1579828 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU942982.1	ncRNA:24   CCCGGUCACCGUAUGUUCCUUGCU   1   |||||||||*|||||||||||=|| targets:96   GGGCCAGUGSCAUACAAGGAAUGA   119 Target Full Sequence	2.5	Zea mays clone 1548806 mRNA sequence	NA	coding protein	psRNATarget
EU967272.1	ncRNA:24   CCCGGUCACCGUAUGUUCCUUGCU   1   |||=|||||||||||||||||=|| targets:601   GGGUCAGUGGCAUACAAGGAAUGA   624 Target Full Sequence	1.5	Zea mays clone 300934 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU967272.1	ncRNA:24   CCCGGUCACCGUAUGUUCCUUGCU   1   ***||||||||||||||||||=|| targets:631   UUUCCAGUGGCAUACAAGGAAUGA   654 Target Full Sequence	1.5	Zea mays clone 300934 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU950000.1	ncRNA:24   CCCGGUCACCGUAUGUUCCUUGCU   1   ****=||||*|||=|||||||||| targets:745   UUCAUAGUGUCAUGCAAGGAACGA   768 Target Full Sequence	2.5	Zea mays clone 456984 mRNA sequence	NA	coding protein	psRNATarget