Search result

BaseInfo

ncRNA ID	osa-miRf10826-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - GCCCGUCACAGAUGAGUCAUCC - NA
Stem-loop(if miRNA)	U U     C                   CC        -  ----G      AUCU  C UAGGG CCGUCACAGAUGAGUCAUC  UGACGGGC CU     AAUGUC    C  | ||||| |||||||||||||||||||  |||||||| ||     ||||||  G AUCCC GGCAGUGUCUACUCAGUAG  ACUGUCCG GG     UUACGG    A G C     A                   CC        A  UAUGA      GCUA
Stem-loop sequence	UCUUAGGGCCCGUCACAGAUGAGUCAUCCCUGACGGGCCUGAAUGUCAUCUCAAUCGGGCAUUAGUAUGGAGCCUGUCACCGAUGACUCAUCUGUGACGGACCCUACGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015761270.1	ncRNA:22   CCUACUGAGUAGACACUGCCCG   1   *||||||||||||||||||||= targets:14   UGAUGACUCAUCUGUGACGGGU   35 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270068 (LOC9270068), mRNA	uncharacterized LOC9270068(LOC9270068)	coding protein	psRNATarget
AK107543.1	ncRNA:22   CCUACUGAGUAGACACUGCCCG   1   *|||||*||||||*|||||||| targets:1581   UGAUGAGUCAUCUAUGACGGGC   1602 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence	NA	coding protein	psRNATarget
AK119390.1	ncRNA:22   CCUACUGAGUAGACACUGCCCG   1   *|||||||||||*||||||||| targets:3075   AGAUGACUCAUCAGUGACGGGC   3096 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence	NA	coding protein	psRNATarget
AK068923.1	ncRNA:22   CCUACUGAGUAGACACUGCCCG   1   *|||||||||||*||||||||| targets:1231   AGAUGACUCAUCAGUGACGGGC   1252 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence	NA	coding protein	psRNATarget
XM_015779008.1	ncRNA:22   CCUACUGAGUAGACACUGCCCG   1   ||=||||*||*||||||||||| targets:1373   GGGUGACCCACCUGUGACGGGC   1394 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X3, mRNA	uncharacterized LOC107280566(LOC107280566)	coding protein	psRNATarget
XM_015779007.1	ncRNA:22   CCUACUGAGUAGACACUGCCCG   1   ||=||||*||*||||||||||| targets:3243   GGGUGACCCACCUGUGACGGGC   3264 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X2, mRNA	uncharacterized LOC107280566(LOC107280566)	coding protein	psRNATarget
XM_015779006.1	ncRNA:22   CCUACUGAGUAGACACUGCCCG   1   ||=||||*||*||||||||||| targets:3334   GGGUGACCCACCUGUGACGGGC   3355 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X1, mRNA	uncharacterized LOC107280566(LOC107280566)	coding protein	psRNATarget
AK063612.1	ncRNA:22   CCUACUG---AGUAGACACUGCCCG   1   **=||||---||||||||||||||| targets:908   CAGUGACGGGUCAUCUGUGACGGGC   932 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:001-118-D05, full insert sequence	NA	coding protein	psRNATarget
AK063612.1	ncRNA:22   CCUACUGAGUAGACACUGCCCG   1   *|||||*||||||*|||||||| targets:949   AGAUGAGUCAUCUCUGACGGGC   970 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-118-D05, full insert sequence	NA	coding protein	psRNATarget
AK288547.1	ncRNA:22   CCUACUGAGUAGACACUGCCCG   1   *|||*=*||||||||||||||| targets:158   AGAUAGGUCAUCUGUGACGGGC   179 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090046I18, full insert sequence	NA	coding protein	psRNATarget
AK288547.1	ncRNA:22   CCUACUGAGUAGACACUGCCCG   1   **|**|*||||||||||||||| targets:2   UCAGUAGUCAUCUGUGACGGGC   23 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090046I18, full insert sequence	NA	coding protein	psRNATarget