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BaseInfo

ncRNA ID novel_zma_miR12289
Species Zea mays
Class miRNA
Genome position Chr7:88812439-88812490 [-]
Reference genome RefGen_v4
Source SRR5105959
Length 21
Mature sequence(if miRNA) 32 - CUAAUAUUUUGAUCAGAGGAU - 52
Stem-loop(if miRNA) --C   U     G    G   AUGAU
   UAA AUUUU AUCA AGG     G
   ||| ||||| |||| |||     A
   GUU UAGAG UAGU UCC     A
GUA   U     G    -   AGAAG
Stem-loop sequence CUAAUAUUUUGAUCAGAGGAUGAUGAAGAAGACCUUGAUGGAGAUUUUGAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU968258.1
ncRNA:21   UAGGAGACUAGUUUUAUAAUC   1
  |*|||||||||||||||||||
targets:534   ACCCUCUGAUCAAAAUAUUAG   554

0.0 Zea mays clone 317743 hypothetical protein mRNA, complete cds NA coding protein psRNATarget