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BaseInfo

ncRNA ID	novel_zma_miR12276
Species	Zea mays
Class	miRNA
Genome position	Chr6:102216592-102216645 [-]
Reference genome	RefGen_v4
Source	SRR5105959;SRR5105961;SRR5105963
Length	24
Mature sequence(if miRNA)	1 - AGCCGUCGGACAUAACCUUAUGUC - 24
Stem-loop(if miRNA)	--           U          AUC   CAUAAGGUUAU UUCGAUGGCU   A   ||||||||||| ||||||||||   GUAUUCCAAUA AGGCUGCCGA   G CU           C          AUA
Stem-loop sequence	CAUAAGGUUAUUUUCGAUGGCUAUCAGAUAAGCCGUCGGACAUAACCUUAUGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166317.1	ncRNA:24   CUGUAUUCCAAUACAGGCUGCCGA   1   ||*||||||||||||||||||||* targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33 Target Full Sequence	1.0	Sequence 3981 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237986.1	ncRNA:24   CUGUAUUCCAAUACAGGCUGCCGA   1   ||*||||||||||||||||||||* targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33 Target Full Sequence	1.0	Sequence 3981 from Patent EP2985353	NA	coding protein	psRNATarget
HI405856.1	ncRNA:24   CUGUAUUCCAAUACAGGCUGCCGA   1   ||*||||||||||||||||||||* targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33 Target Full Sequence	1.0	Sequence 3981 from Patent EP2074227	NA	coding protein	psRNATarget
HI406959.1	ncRNA:24   CUGUAUUCCAAUACAGGCUGCCGA   1   ||||||||*||||||||*|||||| targets:9   GACAUAAGCUUAUGUCCAACGGCU   32 Target Full Sequence	2.5	Sequence 5084 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239089.1	ncRNA:24   CUGUAUUCCAAUACAGGCUGCCGA   1   ||||||||*||||||||*|||||| targets:9   GACAUAAGCUUAUGUCCAACGGCU   32 Target Full Sequence	2.5	Sequence 5084 from Patent EP2985353	NA	coding protein	psRNATarget
JB167420.1	ncRNA:24   CUGUAUUCCAAUACAGGCUGCCGA   1   ||||||||*||||||||*|||||| targets:9   GACAUAAGCUUAUGUCCAACGGCU   32 Target Full Sequence	2.5	Sequence 5084 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239068.1	ncRNA:24   CUGUAUUCCAAUACAGGCUGCCGA   1   *|||||||*||||||||*|||||| targets:59   AACAUAAGCUUAUGUCCAACGGCU   82 Target Full Sequence	2.5	Sequence 5063 from Patent EP2985353	NA	coding protein	psRNATarget
HI406938.1	ncRNA:24   CUGUAUUCCAAUACAGGCUGCCGA   1   *|||||||*||||||||*|||||| targets:59   AACAUAAGCUUAUGUCCAACGGCU   82 Target Full Sequence	2.5	Sequence 5063 from Patent EP2074227	NA	coding protein	psRNATarget
JB167399.1	ncRNA:24   CUGUAUUCCAAUACAGGCUGCCGA   1   *|||||||*||||||||*|||||| targets:59   AACAUAAGCUUAUGUCCAACGGCU   82 Target Full Sequence	2.5	Sequence 5063 from Patent EP2559767	NA	coding protein	psRNATarget
EU944465.1	ncRNA:24   CUGUAUUCCAAUACAGGCUGCCGA   1   *|||||||*||||||||*|||||| targets:187   AACAUAAGCUUAUGUCCAACGGCU   210 Target Full Sequence	2.5	Zea mays clone 219525 mRNA sequence	NA	coding protein	psRNATarget