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BaseInfo

ncRNA ID	novel_zma_miR12255
Species	Zea mays
Class	miRNA
Genome position	Chr5:175970618-175970701 [-]
Reference genome	RefGen_v4
Source	SRR5105959;SRR5105963
Length	21
Mature sequence(if miRNA)	64 - AUGAAGAGGAUUGAGGGUGCU - 84
Stem-loop(if miRNA)	--AUGAA            U        -   U         A        GAGGAUUGAGGG GCUAGAAU CUC CACUAUUUA A        |||||||||||| |||||||| ||| |||||||||        CUCCUAACUUCC CGAUCUUA GAG GUGAUAAGU A AUUAUCC            C        U   -         U
Stem-loop sequence	AUGAAGAGGAUUGAGGGUGCUAGAAUCUCUCACUAUUUAAAAUUGAAUAGUGGAGUAUUCUAGCCCCUUCAAUCCUCCCUAUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166488.1	ncRNA:21   UCGUGGGAGUUAGGAGAAGUA   1   |||*||||||||||*|||||| targets:87   AGCCCCCUCAAUCCCCUUCAU   107 Target Full Sequence	2.5	Sequence 4152 from Patent EP2559767	NA	coding protein	psRNATarget
HI406027.1	ncRNA:21   UCGUGGGAGUUAGGAGAAGUA   1   |||*||||||||||*|||||| targets:87   AGCCCCCUCAAUCCCCUUCAU   107 Target Full Sequence	2.5	Sequence 4152 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238157.1	ncRNA:21   UCGUGGGAGUUAGGAGAAGUA   1   |||*||||||||||*|||||| targets:87   AGCCCCCUCAAUCCCCUUCAU   107 Target Full Sequence	2.5	Sequence 4152 from Patent EP2985353	NA	coding protein	psRNATarget
NM_001174804.1	ncRNA:21   UCGUGGGAGUUAGGAGAAGUA   1   |||*||||||||||*|||||| targets:2623   AGCCCCCUCAAUCCCCUUCAU   2643 Target Full Sequence	2.5	Zea mays Eukaryotic translation initiation factor isoform 4G-2 (umc1280), mRNA	NA	coding protein	psRNATarget
BT062966.1	ncRNA:21   UCGUGGGAGUUAGGAGAAGUA   1   |||*||||||||||*|||||| targets:2623   AGCCCCCUCAAUCCCCUUCAU   2643 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0013E16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008663899.2	ncRNA:21   UCGUGGGAGUUAGGAGAAGUA   1   |||*||||||||||*|||||| targets:2711   AGCCCCCUCAAUCCCCUUCAU   2731 Target Full Sequence	2.5	PREDICTED: Zea mays Eukaryotic translation initiation factor isoform 4G-2 (umc1280), transcript variant X1, mRNA	NA	coding protein	psRNATarget