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BaseInfo

ncRNA ID	ath-miRf10130-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - CACUCGACCUGGGGGUCGAGUGAU - NA
Stem-loop(if miRNA)	U   GG  A                A       GAG   GAGUA  GG      ---A  GG   G AGA       GUGUG  GAU  UG UACUCGACUUCCGGGU GAGUGAU   GUC     GU  UCUGGC    AU  GAU A   UCGAGUG     A  |||  || |||||||||||||||| |||||||   |||     ||  ||||||    ||  ||| |   |||||||  CUA  GU GUGAGCUGGGGGUCCA CUCACUG   UAG     UA  AGACUG    UG  CUA U   AGCUCAU     U G   GU  A                G       AAG   --AGG  GA      GUGG  AG   G -GC       AGUGG
Stem-loop sequence	UGAUGGUGAUACUCGACUUCCGGGUAGAGUGAUGAGGUCGAGUAGUGGUCUGGCAAUGGGAUGAAGAUCGAGUGGUGUGAUGGUGAUACUCGACGUGAUCGAGUGGUGGUCAGAAGAUGGAGAUGAAGUCACUCGACCUGGGGGUCGAGUGAUGUGAUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT015478.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   ||-||||||||||||||||||||| targets:136   AU-ACUCGACCCCCAGGUCGAGUG   158 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   ||-||||||||||||||||||||| targets:136   AU-ACUCGACCCCCAGGUCGAGUG   158 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:24   UAG-UGAGCUGGGGGUCCAGCUCAC   1   |||-||||||||||||||||||||* targets:185   AUCUACUCGACCCCCAGGUCGAGUA   209 Target Full Sequence	1.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   |*|||||||||||||||||||||* targets:1103   ACCACUCGACCCCCAGGUCGAGUA   1126 Target Full Sequence	1.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   |||||||||||||*|||||||||| targets:1616   AUCACUCGACCCCGAGGUCGAGUG   1639 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   |*|||||||||||*|||||||||| targets:853   ACCACUCGACCCCGAGGUCGAGUG   876 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   ||||||||||||||*||||||||* targets:1570   AUCACUCGACCCCCUGGUCGAGUA   1593 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   *|=|||||||||||*||||||||* targets:307   CUUACUCGACCCCCUGGUCGAGUA   330 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   UAG-UGAGCUGGGGGUCCAGCUCAC   1   |||-|||||||||||*||||||||* targets:179   AUCUACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   =*||||||||||||*||||||||* targets:229   GCCACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   UAG-UGAGCUGGGGGUCCAGCUCAC   1   |||-|||||||||||*||||||||* targets:179   AUCUACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   =*||||||||||||*||||||||* targets:229   GCCACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   |*||||||||||||*||||||||* targets:89   ACCACUCGACCCCCUGGUCGAGUA   112 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   |*|||||||||*|||||||||||* targets:448   ACCACUCGACCACCAGGUCGAGUA   471 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   |*||||||||||||*||||||||* targets:123   ACCACUCGACCCCCUGGUCGAGUA   146 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   |*||||||||||||*||||||||* targets:498   ACCACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   UAGUGAGCUGGGGGUCCAGCUCAC   1   |*||||||||||||*||||||||* targets:498   ACCACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget