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BaseInfo

ncRNA ID novel_zma_miR12229
Species Zea mays
Class miRNA
Genome position Chr10:59152053-59152129 [-]
Reference genome RefGen_v4
Source SRR5105959
Length 24
Mature sequence(if miRNA) 1 - UAAUUUAUAACCGUCUAAAAAGGA - 24
Stem-loop(if miRNA) UG     A             -------CC      AAAGU
  UUUUU AGAUGGUUAUAAA         GUCUUA     U
  ||||| |||||||||||||         ||||||
  GAAAA UCUGCCAAUAUUU         CAGAAU     A
AG     A             AAUUUUUUA      AAAUU
Stem-loop sequence UGUUUUUAAGAUGGUUAUAAACCGUCUUAAAAGUUAUUAAAUAAGACAUUUUUUAAUUUAUAACCGUCUAAAAAGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT067946.2
ncRNA:24   AGGAAAAAUCUGCCAAUAUUUAAU   1
  *****|||=*||||||||||||||
targets:665   GAAACUUUGAACGGUUAUAAAUUA   688

2.0 Zea mays full-length cDNA clone ZM_BFb0003M08 mRNA, complete cds NA coding protein psRNATarget