ncRNA ID | novel_zma_miR12228 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:256172862-256173054 [+] |
Reference genome | RefGen_v4 |
Source | SRR1997865 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUAACAUUAGCACUGGCGGACU - 24 |
Stem-loop(if miRNA) |
--      CA             AC  C           ACAU                         A              C       GAAAU   AAAUAA  UUAGCACUGGCGG  UG UUAAGAAAACC    GUGGAAACAUGAUUUUCACUGGUGG UUUCUUUAGCAGCC GCCAGUG     A   ||||||  |||||||||||||  || |||||||||||    ||||||||||||||||||||||||| |||||||||||||| |||||||     A   UUUAUU  AAUCGUGAUCGCC  AC AAUUCUUUUGG    CACUUUUGUACUAAAAGUGAUCGCC AAAGAAAUCGUCGG CGGUCAC     C CA      UA             CA  C           CAGC                         A              A       GAUUA |
Stem-loop sequence | AAAUAACAUUAGCACUGGCGGACUGCUUAAGAAAACCACAUGUGGAAACAUGAUUUUCACUGGUGGAUUUCUUUAGCAGCCCGCCAGUGGAAAUAACAUUAGCACUGGCAGGCUGCUAAAGAAAACCGCUAGUGAAAAUCAUGUUUUCACCGACGGUUUUCUUAACCAACCCGCUAGUGCUAAAUUUAUUUAC |