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BaseInfo

ncRNA ID novel_zma_miR12228
Species Zea mays
Class miRNA
Genome position Chr1:256172862-256173054 [+]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 1 - AAAUAACAUUAGCACUGGCGGACU - 24
Stem-loop(if miRNA) --      CA             AC  C           ACAU                         A              C       GAAAU
  AAAUAA  UUAGCACUGGCGG  UG UUAAGAAAACC    GUGGAAACAUGAUUUUCACUGGUGG UUUCUUUAGCAGCC GCCAGUG     A
  ||||||  |||||||||||||  || |||||||||||    ||||||||||||||||||||||||| |||||||||||||| |||||||     A
  UUUAUU  AAUCGUGAUCGCC  AC AAUUCUUUUGG    CACUUUUGUACUAAAAGUGAUCGCC AAAGAAAUCGUCGG CGGUCAC     C
CA      UA             CA  C           CAGC                         A              A       GAUUA
Stem-loop sequence AAAUAACAUUAGCACUGGCGGACUGCUUAAGAAAACCACAUGUGGAAACAUGAUUUUCACUGGUGGAUUUCUUUAGCAGCCCGCCAGUGGAAAUAACAUUAGCACUGGCAGGCUGCUAAAGAAAACCGCUAGUGAAAAUCAUGUUUUCACCGACGGUUUUCUUAACCAACCCGCUAGUGCUAAAUUUAUUUAC