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BaseInfo

ncRNA ID	novel_zma_miR12226
Species	Zea mays
Class	miRNA
Genome position	Chr4:208002917-208003042 [-]
Reference genome	RefGen_v4
Source	SRR5105959
Length	24
Mature sequence(if miRNA)	103 - AGGACAGAGAAUAUUUUUAGGGGA - 126
Stem-loop(if miRNA)	--       -       UUU     GA  AAA   A   GA ---------GUU -   GAGACAGCCUA   AGGACAG AGAAUAU   UAGGG  UG   UUU GGG  C            G CUG           A   ||||||| |||||||   |||||  ||   ||| |||  |            | |||           G   UUCUGUC UCUUAUA   AUCCC  AC   AAA CCC  G            C UGA           G UU       G       UAU     -G  --C   -   UC GUAUUUUAACAG G   GAAUUUAAUCG
Stem-loop sequence	AGGACAGAGAAUAUUUUUAGGGGAUGAAAUUUAGGGGACGUUGCUGGAGACAGCCUAAGGGCUAAUUUAAGAGUGCGACAAUUUUAUGGCUCCCAAACCAGCCCUAUAUAUAUUCUGCUGUCUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550176.1	ncRNA:24   AGGGGAUUU--UUAUAAGAGACAGGA   1   |||||||||--||||||||||||||| targets:934   UCCCCUAAAGGAAUAUUCUCUGUCCU   959 Target Full Sequence	2.5	PREDICTED: Zea mays small G protein signaling modulator 1 (LOC103649936), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_008649072.2	ncRNA:24   AGGGGAUUU--UUAUAAGAGACAGGA   1   |||||||||--||||||||||||||| targets:1910   UCCCCUAAAGGAAUAUUCUCUGUCCU   1935 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100191662 (cl18267_1), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008649073.2	ncRNA:24   AGGGGAUUU--UUAUAAGAGACAGGA   1   |||||||||--||||||||||||||| targets:1811   UCCCCUAAAGGAAUAUUCUCUGUCCU   1836 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100191662 (cl18267_1), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT067838.1	ncRNA:24   AGGGGAUUU--UUAUAAGAGACAGGA   1   |||||||||--||||||||||||||| targets:585   UCCCCUAAAGGAAUAUUCUCUGUCCU   610 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0167G13 mRNA, complete cds	NA	coding protein	psRNATarget
EZ107270.1	ncRNA:24   AGGGGAUUU--UUAUAAGAGACAGGA   1   |||||||||--||||||||||||||| targets:41   UCCCCUAAAGGAAUAUUCUCUGUCCU   66 Target Full Sequence	2.5	TSA: Zea mays contig42928, mRNA sequence	NA	coding protein	psRNATarget
BT054664.2	ncRNA:24   AGGGGAUUUUUAUAAGAGACAGGA   1   *|*==||||||||*|||||||||| targets:9   ACAUUUAAAAAUAGUCUCUGUCCU   32 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0055H10 mRNA, complete cds	NA	coding protein	psRNATarget