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BaseInfo

ncRNA ID novel_zma_miR12224
Species Zea mays
Class miRNA
Genome position Chr4:222378845-222378930 [-]
Reference genome RefGen_v4
Source SRR5105959
Length 24
Mature sequence(if miRNA) 63 - ACACAUAACUAAUUGUGGGCUGUG - 86
Stem-loop(if miRNA) --A      A                     --   -  A  ACU
   CACAUA CUAAUUGUGGGCUGUGUCGUG  GGC CG UG   G
   |||||| |||||||||||||||||||||  ||| || ||
   GUGUAU GAUUAAUACCCGACACGGCAC  UCG GC AC   G
UUC      A                     GG   U  -  ACG
Stem-loop sequence ACACAUAACUAAUUGUGGGCUGUGUCGUGGGCCGAUGACUGGGCACACGUGCUGGCACGGCACAGCCCAUAAUUAGAUAUGUGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001111881.2
ncRNA:24   GUGUCGGGUGUUAAUCAAUACACA   1
  =|||*||||||||||*||||||||
targets:934   UACAACCCACAAUUACUUAUGUGU   957

1.5 Zea mays male-gametophyte specific 1 (mgs1), mRNA NA coding protein psRNATarget