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BaseInfo

ncRNA ID novel_zma_miR12217
Species Zea mays
Class miRNA
Genome position Chr4:209637867-209638056 [+]
Reference genome RefGen_v4
Source SRR5105959
Length 23
Mature sequence(if miRNA) 1 - CAUCUCAGCUUACCUCAUCUAUA - 23
Stem-loop(if miRNA) --                                                          -CACUU                UUGUGCUUU   ACU  U
  CAUCUCAGCUUACCUCAUCUAUAUACAAAAUUUUAUGGUCAAAUUCAUCUUACUCUAG      CAAAAAAGACAAUUUU         UGA   AC A
  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||         |||   ||
  GUAGAGUCGAAUGGAGUAGGUAUAUGUUUUAAAGUACCAGUUUAAGUAGAAUGAGAUU      GUUUUUUCUGUUAAAG         ACU   UG C
AU                                                          AUCAAU                ---------   GUU  U
Stem-loop sequence CAUCUCAGCUUACCUCAUCUAUAUACAAAAUUUUAUGGUCAAAUUCAUCUUACUCUAGCACUUCAAAAAAGACAAUUUUUUGUGCUUUUGAACUACUACUGUUUGUCAGAAAUUGUCUUUUUUGUAACUAUUAGAGUAAGAUGAAUUUGACCAUGAAAUUUUGUAUAUGGAUGAGGUAAGCUGAGAUGUA