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BaseInfo

ncRNA ID	novel_zma_miR12200
Species	Zea mays
Class	miRNA
Genome position	Chr3:167521909-167521987 [-]
Reference genome	RefGen_v4
Source	SRR5105959
Length	24
Mature sequence(if miRNA)	1 - CUUGCUUCUGUAGGGGGUUGAGAA - 24
Stem-loop(if miRNA)	--  UG G    -GU       C  CAGUC     U     GU   CU  A CCCU   AGAAGCA AG     GAGGC GUCGG  C   ||  | ||||   ||||||| ||     ||||| |||||  C   GA  U GGGG   UCUUCGU UC     CUCUG CAGUC  U AA  GU G    AUG       -  -----     -     GU
Stem-loop sequence	CUUGAGCCCUGUAGAAGCACAGCAGUCGAGGCUGUCGGGUCCUUGCUGACGUCUCCUUGCUUCUGUAGGGGGUUGAGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ103193.1	ncRNA:24   AAGAGUUGGGGGAUGUCUUCGUUC   1   ||||||=||||||||=|||||||| targets:12   UUCUCAGCCCCCUACGGAAGCAAG   35 Target Full Sequence	2.5	TSA: Zea mays contig38850, mRNA sequence	NA	coding protein	psRNATarget
XM_008654039.1	ncRNA:24   AAGAGUUGGGGGAUGUCUUCGUUC   1   ||||||=||||||||=|||||||| targets:787   UUCUCAGCCCCCUACGGAAGCAAG   810 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103632220 (LOC103632220), mRNA	NA	coding protein	psRNATarget
EU952221.1	ncRNA:24   AAGAGUUGGGGGAUGUCUUCGUUC   1   ||||||=||||||||=|||||||| targets:793   UUCUCAGCCCCCUACGGAAGCAAG   816 Target Full Sequence	2.5	Zea mays clone 1229283 mRNA sequence	NA	coding protein	psRNATarget
BT055468.2	ncRNA:24   AA---GAGUUGGGGGAUGUCUUCGUUC   1   ||---|*=|=||||||||||||||||* targets:933   UUGCCCCUAGCCCCCUACAGAAGCAAC   959 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0282M09 mRNA, complete cds	NA	coding protein	psRNATarget
BT067706.2	ncRNA:24   AA---GAGUUGGGGGAUGUCUUCGUUC   1   ||---|*=|=||||||||||||||||* targets:904   UUGCCCCUAGCCCCCUACAGAAGCAAC   930 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0125G19 mRNA, complete cds	NA	coding protein	psRNATarget