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BaseInfo

ncRNA ID novel_zma_miR12192
Species Zea mays
Class miRNA
Genome position Chr3:192096083-192096171 [+]
Reference genome RefGen_v4
Source SRR5105959;SRR5105961
Length 21
Mature sequence(if miRNA) 1 - GUGUGGCUCUCCUCUGGCAUG - 21
Stem-loop(if miRNA) --GU UG        C      GAA    C  CU AG    AC   C
    G  GCUCUCCU UGGCAU   GGCG GG  G  AGGC  GAA A
    |  |||||||| ||||||   |||| ||  |  ||||  |||
    C  CGAGAGGA ACCGUA   CCGU CC  C  UCCG  CUU G
GUCC GU        A      --A    -  -- CU    GU   U
Stem-loop sequence GUGUGGCUCUCCUCUGGCAUGAAGGCGCGGCUGAGAGGCACGAACAGUUUCUGGCCUUCCCCUGCCAAUGCCAAAGGAGAGCUGCCCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949059.1
ncRNA:21   GUACGGUCUCCUCUCGGUGUG   1
  |||||||||||||||||||||
targets:139   CAUGCCAGAGGAGAGCCACAC   159

0.0 Zea mays clone 394906 mRNA sequence NA coding protein psRNATarget