ncRNA ID | novel_zma_miR12192 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:192096083-192096171 [+] |
Reference genome | RefGen_v4 |
Source | SRR5105959;SRR5105961 |
Length | 21 |
Mature sequence(if miRNA) | 1 - GUGUGGCUCUCCUCUGGCAUG - 21 |
Stem-loop(if miRNA) |
--GU UG        C      GAA    C  CU AG    AC   C     G  GCUCUCCU UGGCAU   GGCG GG  G  AGGC  GAA A     |  |||||||| ||||||   |||| ||  |  ||||  |||     C  CGAGAGGA ACCGUA   CCGU CC  C  UCCG  CUU G GUCC GU        A      --A    -  -- CU    GU   U |
Stem-loop sequence | GUGUGGCUCUCCUCUGGCAUGAAGGCGCGGCUGAGAGGCACGAACAGUUUCUGGCCUUCCCCUGCCAAUGCCAAAGGAGAGCUGCCCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU949059.1 |
|
0.0 | Zea mays clone 394906 mRNA sequence | NA | coding protein | psRNATarget |