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BaseInfo

ncRNA ID	novel_zma_miR12191
Species	Zea mays
Class	miRNA
Genome position	Chr3:19726458-19726547 [+]
Reference genome	RefGen_v4
Source	SRR5105959
Length	21
Mature sequence(if miRNA)	1 - AAUCGGAGAGGAUUGGAGGGG - 21
Stem-loop(if miRNA)	--      A A                     CA  C       G   AAUCGG G GGAUUGGAGGGGUUAAAAUCU  UC UUAUUUA A   |||||| | |||||||||||||||||||||  || |||||||   UUGGCC C CCUGACCUCCCCGAUUUUAGG  AG AAUAAGU A UU      G C                     AG  A       U
Stem-loop sequence	AAUCGGAGAGGAUUGGAGGGGUUAAAAUCUCAUCCUUAUUUAGAAUUGAAUAAAGAGAGGAUUUUAGCCCCUCCAGUCCCCGCCGGUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008664337.2	ncRNA:21   GGGGAGGUUAGGAGAGGCUAA   1   =|=|||||||||||||||=|| targets:2087   UCUCUCCAAUCCUCUCCGGUU   2107 Target Full Sequence	2.5	PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA	NA	coding protein	psRNATarget
HI405820.1	ncRNA:21   GGGGAGGUUAGGAGAGGCUAA   1   ||||||=|||||*|||||||| targets:205   CCCCUCUAAUCCCCUCCGAUU   225 Target Full Sequence	2.5	Sequence 3945 from Patent EP2074227	NA	coding protein	psRNATarget
JB166281.1	ncRNA:21   GGGGAGGUUAGGAGAGGCUAA   1   ||||||=|||||*|||||||| targets:205   CCCCUCUAAUCCCCUCCGAUU   225 Target Full Sequence	2.5	Sequence 3945 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237950.1	ncRNA:21   GGGGAGGUUAGGAGAGGCUAA   1   ||||||=|||||*|||||||| targets:205   CCCCUCUAAUCCCCUCCGAUU   225 Target Full Sequence	2.5	Sequence 3945 from Patent EP2985353	NA	coding protein	psRNATarget
NM_001175145.1	ncRNA:21   GGGGAGGUUAGGAGAGGCUAA   1   |*||||==||||||||||||| targets:1515   CACCUCUGAUCCUCUCCGAUU   1535 Target Full Sequence	2.0	Zea mays putative MATE efflux family protein (LOC100382400), mRNA	NA	coding protein	psRNATarget
BT064167.1	ncRNA:21   GGGGAGGUUAGGAGAGGCUAA   1   |*||||==||||||||||||| targets:1515   CACCUCUGAUCCUCUCCGAUU   1535 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0143P12 mRNA, complete cds	NA	coding protein	psRNATarget