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BaseInfo

ncRNA ID	novel_zma_miR12188
Species	Zea mays
Class	miRNA
Genome position	Chr3:113223291-113223422 [+]
Reference genome	RefGen_v4
Source	SRR5105959;SRR5105961
Length	21
Mature sequence(if miRNA)	1 - AUAAGGUAAUCCUCGUCGGCC - 21
Stem-loop(if miRNA)	--A    G                 C A         U        U         AUC     AC    UAAG UAAUCCUCGUCGGCCGU A AUAGUCGAC GGAAUUAA UUAAUUUCC   GGCUA  G    |||| ||||||||||||||||| | ||||||||| |||||||| |||||||||   |||||    AUUC AUUAGGGGUAGCCGGUA U UAUCGGCUG CCUUAAUU AAUUAAGGG   CCGAU  U UCA    G                 U C         C        U         CAU     CA
Stem-loop sequence	AUAAGGUAAUCCUCGUCGGCCGUCAAAUAGUCGACUGGAAUUAAUUUAAUUUCCAUCGGCUAACGUACUAGCCUACGGGAAUUAAUUUAAUUCCCGUCGGCUAUCUUAUGGCCGAUGGGGAUUAGCUUAACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT036946.1	ncRNA:21   CCGGCUGCUCCUAAUGGAAUA   1   *|*|||||||||||||||*|| targets:568   CGACGACGAGGAUUACCUCAU   588 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0148G15 mRNA, complete cds	NA	coding protein	psRNATarget
BT039586.1	ncRNA:21   CCGGCUGCUCCUAAUGGAAUA   1   *|*|||||||||||||||*|| targets:854   CGACGACGAGGAUUACCUCAU   874 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0031F03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157679.1	ncRNA:21   CCGGCUGCUCCUAAUGGAAUA   1   *|*|||||||||*|||||||| targets:880   CGACGACGAGGACUACCUUAU   900 Target Full Sequence	2.5	Zea mays uncharacterized LOC100284784 (gpm454), mRNA	NA	coding protein	psRNATarget
EU969672.1	ncRNA:21   CCGGCUGCUCCUAAUGGAAUA   1   *|*|||||||||*|||||||| targets:880   CGACGACGAGGACUACCUUAU   900 Target Full Sequence	2.5	Zea mays clone 333885 salt tolerance-like protein mRNA, complete cds	NA	coding protein	psRNATarget