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BaseInfo

ncRNA ID novel_zma_miR12186
Species Zea mays
Class miRNA
Genome position Chr1:239150193-239150260 [+]
Reference genome RefGen_v4
Source SRR1997865;SRR1997866
Length 24
Mature sequence(if miRNA) 45 - GGCGAUUAAGUAACUCUCGUCGGC - 68
Stem-loop(if miRNA) --        A   A    C  -        CCAA
  CGAUGGGA UUA UUAA UC CCGUCGGC    A
  |||||||| ||| |||| || ||||||||
  GCUGCUCU AAU AAUU AG GGUAGCCG    C
CG        C   G    -  C        AUCC
Stem-loop sequence CGAUGGGAAUUAAUUAACUCCCGUCGGCCCAAACCCUAGCCGAUGGCGAUUAAGUAACUCUCGUCGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020551996.1
ncRNA:24   CGGCUGCUCUCAAUGAAUUAGCGG   1
  |||||||=||||||=|||||||||
targets:397   GCCGACGGGAGUUAUUUAAUCGCC   420

2.5 PREDICTED: Zea mays glycine-rich protein 2-like (LOC109945681), mRNA NA coding protein psRNATarget