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BaseInfo

ncRNA ID novel_zma_miR12182
Species Zea mays
Class miRNA
Genome position Chr1:238546156-238546230 [+]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 1 - GGACAGUCCGGCGUGUGGCACCAG - 24
Stem-loop(if miRNA) --    A     -   U U                   
  GGAC GUCCG GCG G GGCACCAGACAGUCCGGUGU
  |||| ||||| ||| | |||||||||||||||||||G
  CCUG UAGGC CGC C CCGUGGUCUGUCAGGCCACC
CG    A     A   U -                   
Stem-loop sequence GGACAGUCCGGCGUGUGGCACCAGACAGUCCGGUGUGCCACCGGACUGUCUGGUGCCCUCGCACGGAUAGUCCGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943461.1
ncRNA:24   GACCACGGUGUGCGGCCUGACAGG   1
  |*|||||||||||||*||||||||
targets:1194   CCGGUGCCACACGCCAGACUGUCC   1217

1.5 Zea mays clone 1624403 mRNA sequence NA coding protein psRNATarget