ncRNA ID | novel_zma_miR12174 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:118813639-118813711 [-] |
Reference genome | RefGen_v4 |
Source | SRR5105959 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUCCUAAUGCCUCCCAUUCCUA - 22 |
Stem-loop(if miRNA) |
--  C      -A   GG        - --U       U   GG AUGGGA  CAU  AGGAAGGC C   AUGAGGU G   || ||||||  |||  |||||||| |   |||||||   CC UACCCU  GUA  UCCUUCUG G   UACUCCA A AU  U      CC   -A        U UUU       A |
Stem-loop sequence | GGCAUGGGAACAUGGAGGAAGGCCUAUGAGGUUGAAACCUCAUUUUGUGUCUUCCUAAUGCCUCCCAUUCCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU943944.1 |
|
2.5 | Zea mays clone 1701522 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU955520.1 |
|
3.0 | Zea mays clone 1535323 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001149460.1 |
|
3.0 | Zea mays hypothetical protein (TIDP3280), mRNA | NA | coding protein | psRNATarget |