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BaseInfo

ncRNA ID novel_zma_miR12170
Species Zea mays
Class miRNA
Genome position Chr2:176492808-176492855 [+]
Reference genome RefGen_v4
Source SRR5105959;SRR5105961
Length 21
Mature sequence(if miRNA) 1 - CUUAUCUUCGCCUGGUUCCGU - 21
Stem-loop(if miRNA) --   A   U   -    --     U
  CUU UCU CGC CUGG  UUCCG U
  ||| ||| ||| ||||  ||||| G
  GAA AGG GCG GACC  AGGGC U
CU   -   -   C    UC     A
Stem-loop sequence CUUAUCUUCGCCUGGUUCCGUUGUACGGGACUCCAGCGCGGGAAAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY110556.1
ncRNA:21   UGCCUUGGUCCGCUUCUAUUC   1
  *=||||*||||||*|||||||
targets:46   CUGGAAGCAGGCGUAGAUAAG   66

2.5 Zea mays CL11258_1 mRNA sequence NA coding protein psRNATarget