Search result

BaseInfo

ncRNA ID	osa-miRf10813-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UCGCGAGCUGCUUGAGCUCGGCU - NA
Stem-loop(if miRNA)	GA      -       C              CUGU  A  C  CUCGAGCUCGAUUCGUCAACAAUUCGA UC  GGCUCG CGAGCUG UUGAGCUCGGCUUG    AG CU GG                           G ||  |||||| ||||||| ||||||||||||||    || || ||                           C AG  CCGAGC GCUCGAU AGCUCGAGCCGAGC    GU UC GA                           C   AC      U       A              ---A  -  -  GCGUUCGAACCUCGAUCCGAACUCAAG
Stem-loop sequence	UCGAGGCUCGCGAGCUGCUUGAGCUCGGCUUGCUGUAGACUCGGCUCGAGCUCGAUUCGUCAACAAUUCGAGCCGAACUCAAGCCUAGCUCCAAGCUUGCGAGCUUGACGAGCCGAGCUCGAAUAGCUCGUCGAGCCCAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015784053.1	ncRNA:23   UCGGCUCGAGUUCGUCGAGC-GCU   1   ||||||||||||||||||||-||| targets:505   AGCCGAGCUCAAGCAGCUCGACGA   528 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9268468 (LOC9268468), mRNA	uncharacterized LOC9268468(LOC9268468)	coding protein	psRNATarget
AK288080.1	ncRNA:23   UCGGCUCGAGUUCGUCGAGC-GCU   1   ||||||||||||||||||||-||| targets:481   AGCCGAGCUCAAGCAGCUCGACGA   504 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J075166J19, full insert sequence	NA	coding protein	psRNATarget
AK240999.1	ncRNA:23   UCGGCUCGAGUUCGUCGAGCGCU   1   ||*||*|||||||*||||||||| targets:4217   AGGCGUGCUCAAGAAGCUCGCGA   4239 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065053C05, full insert sequence	NA	coding protein	psRNATarget
BT130473.1	ncRNA:23   UCGGCUCGAGUUCGUCGAGCGCU   1   ||*||*|||||||*||||||||| targets:477   AGGCGUGCUCAAGAAGCUCGCGA   499 Target Full Sequence	2.5	Oryza sativa clone RRlibC00856 mRNA sequence	NA	coding protein	psRNATarget
XM_015768852.1	ncRNA:23   UCGGCUCGAGUUCGUCGAGCGCU   1   ||--|||*||||||||=|||||| targets:2052   AG--GAGAUCAAGCAGUUCGCGA   2072 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group glycerophosphodiester phosphodiesterase GDPDL7 (LOC4328548), mRNA	glycerophosphodiester phosphodiesterase GDPDL7(LOC4328548)	coding protein	psRNATarget
AK068914.1	ncRNA:23   UCGGCUCGAGUUCGUCGAGCGCU   1   ||--|||*||||||||=|||||| targets:1773   AG--GAGAUCAAGCAGUUCGCGA   1793 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023002M10, full insert sequence	NA	coding protein	psRNATarget