| ncRNA ID | novel_zma_miR12159 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr1:94905040-94905257 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR5105959 |
| Length | 22 |
| Mature sequence(if miRNA) | 1 - ACCGGCUCACCAUCGUCUUGCC - 22 |
| Stem-loop(if miRNA) |
--CC A A G G G G G U AGACGAUGGUGAGCCGGUGUACU UGUCCGGAUGUGUGGUCACAAAAUU AAAGCUGCCCCGGCU CAU UGUGUGCUUCUCUUCUCUUA GU GG UGCUAAG G ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| || || ||||||| UCUGCUACCACUCGGCCACAUGA ACAGGCCUACACACCAGUGUUUUAA UUUCGGCGGGGCCGA GUA ACACGCGAAGAGAAGAGAAU CA CC AUGAUUC A CCGU G A A G A G G U |
| Stem-loop sequence | CCAGACGAUGGUGAGCCGGUGUACUAUGUCCGGAUGUGUGGUCACAAAAUUAAAAGCUGCCCCGGCUGCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCACAGAUGAAGCCGGGGCGGCUUUAAAUUUUGUGACCACACAUCCGGACAGAGUACACCGGCUCACCAUCGUCUUGCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_020538582.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_020538581.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| EU940887.1 |
|
2.0 | Zea mays clone 1166254 mRNA sequence | NA | coding protein | psRNATarget |