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BaseInfo

ncRNA ID osa-miRf10812-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CGAGCUCGAAUAGCUCGUCGA - NA
Stem-loop(if miRNA)   GA      -       C              CUGU  A  C  CUCGAGCUCGAUUCGUCAACAAUUCGA
UC  GGCUCG CGAGCUG UUGAGCUCGGCUUG    AG CU GG                           G
||  |||||| ||||||| ||||||||||||||    || || ||                           C
AG  CCGAGC GCUCGAU AGCUCGAGCCGAGC    GU UC GA                           C
  AC      U       A              ---A  -  -  GCGUUCGAACCUCGAUCCGAACUCAAG
Stem-loop sequence UCGAGGCUCGCGAGCUGCUUGAGCUCGGCUUGCUGUAGACUCGGCUCGAGCUCGAUUCGUCAACAAUUCGAGCCGAACUCAAGCCUAGCUCCAAGCUUGCGAGCUUGACGAGCCGAGCUCGAAUAGCUCGUCGAGCCCAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015764104.1
ncRNA:21   AGCUGCUCGAUAAGCUCGAGC   1
  *|||||||||=||||||||||
targets:189   ACGACGAGCUGUUCGAGCUCG   209

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276805 (LOC107276805), mRNA uncharacterized LOC107276805(LOC107276805) coding protein psRNATarget