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BaseInfo

ncRNA ID novel_zma_miR12143
Species Zea mays
Class miRNA
Genome position Chr1:242343093-242343140 [-]
Reference genome RefGen_v4
Source SRR5105959;SRR5105961
Length 21
Mature sequence(if miRNA) 28 - CUUAUCUUCGCCUGGUUCCGU - 48
Stem-loop(if miRNA) --   A   U    U -      U
  CUU UCU CGCC G GUUCCG U
  ||| ||| |||| | |||||| G
  GAA GGG GCGG C CGGGGC U
CU   A   C    C U      A
Stem-loop sequence CUUAUCUUCGCCUGGUUCCGUUGUACGGGGCUCCGGCGCGGGAAAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY110556.1
ncRNA:21   UGCCUUGGUCCGCUUCUAUUC   1
  *=||||*||||||*|||||||
targets:46   CUGGAAGCAGGCGUAGAUAAG   66

2.5 Zea mays CL11258_1 mRNA sequence NA coding protein psRNATarget