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BaseInfo

ncRNA ID novel_zma_miR12135
Species Zea mays
Class miRNA
Genome position Chr1:302675630-302675822 [+]
Reference genome RefGen_v4
Source SRR5105959
Length 23
Mature sequence(if miRNA) 1 - CAUCUCAGCUUACCUCAUCUAUA - 23
Stem-loop(if miRNA) --                                     A                C                      --       GCAUUU    UA
  CAUCUCAGCUUACCUCAUCUAUAUACAAAAUUUUAUG UCAAAUUCAUCUUACU UAGCAGUUACAAAAAAGACAAA  UUUUGGU      GAAC  U
  ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||      ||||  U
  GUAGAGUCGAAUGGAGUAGGUAUAUGUUUUAAAGUAC AGUUUAAGUAGAAUGA AUCGUCAAUGUUUUUUCUGUUU  AAGACUA      UUUG  A
AU                                     C                A                      UA       ------    CC
Stem-loop sequence CAUCUCAGCUUACCUCAUCUAUAUACAAAAUUUUAUGAUCAAAUUCAUCUUACUCUAGCAGUUACAAAAAAGACAAAUUUUGGUGCAUUUGAACUAUUACCGUUUAUCAGAAAUUUUGUCUUUUUUGUAACUGCUAAAGUAAGAUGAAUUUGACCAUGAAAUUUUGUAUAUGGAUGAGGUAAGCUGAGAUGUA