ncRNA ID | novel_zma_miR12135 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:302675630-302675822 [+] |
Reference genome | RefGen_v4 |
Source | SRR5105959 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CAUCUCAGCUUACCUCAUCUAUA - 23 |
Stem-loop(if miRNA) |
--                                     A                C                      --       GCAUUU    UA   CAUCUCAGCUUACCUCAUCUAUAUACAAAAUUUUAUG UCAAAUUCAUCUUACU UAGCAGUUACAAAAAAGACAAA  UUUUGGU      GAAC  U   ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||      ||||  U   GUAGAGUCGAAUGGAGUAGGUAUAUGUUUUAAAGUAC AGUUUAAGUAGAAUGA AUCGUCAAUGUUUUUUCUGUUU  AAGACUA      UUUG  A AU                                     C                A                      UA       ------    CC |
Stem-loop sequence | CAUCUCAGCUUACCUCAUCUAUAUACAAAAUUUUAUGAUCAAAUUCAUCUUACUCUAGCAGUUACAAAAAAGACAAAUUUUGGUGCAUUUGAACUAUUACCGUUUAUCAGAAAUUUUGUCUUUUUUGUAACUGCUAAAGUAAGAUGAAUUUGACCAUGAAAUUUUGUAUAUGGAUGAGGUAAGCUGAGAUGUA |