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BaseInfo

ncRNA ID	novel_zma_miR12134
Species	Zea mays
Class	miRNA
Genome position	Chr1:286163040-286163092 [+]
Reference genome	RefGen_v4
Source	SRR5105959
Length	21
Mature sequence(if miRNA)	1 - CGCCAGAUCGCGGACCGUCCG - 21
Stem-loop(if miRNA)	C  -   AU       C    --      GC CAG  CGCGGAC GUCC  GGCCC  || |||  ||||||| ||||  ||||C  CG GUC  GCGCCUG CAGG  CCGGU A  U   -C       C    CG
Stem-loop sequence	CGCCAGAUCGCGGACCGUCCGGCCCCUGGCCGCGGACCGUCCGCGCCUGUGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ104830.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   ||||||||||||||*|||||| targets:46   CGGACGGUCCGCGACCUGGCG   66 Target Full Sequence	1.5	TSA: Zea mays contig40487, mRNA sequence	NA	coding protein	psRNATarget
EZ099059.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   ||||||||||||||*|||||| targets:31   CGGACGGUCCGCGACCUGGCG   51 Target Full Sequence	1.5	TSA: Zea mays contig34714, mRNA sequence	NA	coding protein	psRNATarget
EZ049111.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   ||||||||||||||*|||||| targets:27   CGGACGGUCCGCGACCUGGCG   47 Target Full Sequence	1.5	TSA: Zea mays contig50229, mRNA sequence	NA	coding protein	psRNATarget
BT061906.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   ||||||||||||||*|||||| targets:216   CGGACGGUCCGCGACCUGGCG   236 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0196M13 mRNA, complete cds	NA	coding protein	psRNATarget
EU971146.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   ||||||||||||||*|||||| targets:352   CGGACGGUCCGCGACCUGGCG   372 Target Full Sequence	1.5	Zea mays clone 358377 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU968855.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   ||||||||||||||*|||||| targets:653   CGGACGGUCCGCGACCUGGCG   673 Target Full Sequence	1.5	Zea mays clone 324570 mRNA sequence	NA	coding protein	psRNATarget
BT034345.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   ||||||||||||||*|||||| targets:688   CGGACGGUCCGCGACCUGGCG   708 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0009F02 mRNA, complete cds	NA	coding protein	psRNATarget
BT064749.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   ||||||||||||||*|||||| targets:1684   CGGACGGUCCGCGACCUGGCG   1704 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0101G18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175289.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   ||||||||||||||*|||||| targets:1684   CGGACGGUCCGCGACCUGGCG   1704 Target Full Sequence	1.5	Zea mays uncharacterized LOC100382557 (LOC100382557), mRNA	NA	coding protein	psRNATarget
XM_020540955.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   ||||||||||||||*|||||| targets:951   CGGACGGUCCGCGACCUGGCG   971 Target Full Sequence	1.5	PREDICTED: Zea mays probable LRR receptor-like serine/threonine-protein kinase At1g07650 (LOC103632613), transcript variant X5, mRNA	NA	coding protein	psRNATarget
LQ241925.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   |*||||||||||||*|||||| targets:43   CAGACGGUCCGCGACCUGGCG   63 Target Full Sequence	1.5	Sequence 7920 from Patent EP2985353	NA	coding protein	psRNATarget
JB170256.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   |*||||||||||||*|||||| targets:43   CAGACGGUCCGCGACCUGGCG   63 Target Full Sequence	1.5	Sequence 7920 from Patent EP2559767	NA	coding protein	psRNATarget
HI409795.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   |*||||||||||||*|||||| targets:43   CAGACGGUCCGCGACCUGGCG   63 Target Full Sequence	1.5	Sequence 7920 from Patent EP2074227	NA	coding protein	psRNATarget
EU952231.1	ncRNA:21   GCCUGCCAGGCGCUAGACCGC   1   |*||||||||||||*|||||| targets:452   CAGACGGUCCGCGACCUGGCG   472 Target Full Sequence	1.5	Zea mays clone 1234152 mRNA sequence	NA	coding protein	psRNATarget