ncRNA ID | novel_zma_miR12123 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:202619649-202619760 [+] |
Reference genome | RefGen_v4 |
Source | SRR1997865 |
Length | 22 |
Mature sequence(if miRNA) | 91 - UGUAGGAAACGGAUGACGCCUA - 112 |
Stem-loop(if miRNA) |
--  UA  C    -C     C   AAA     ---    CU   A  ---GG      UA   GG  UC AUCC  UUCCU UAA   GUGUC   GGCU  UUU GC     UGAAGC  A   ||  || ||||  ||||| |||   |||||   ||||  ||| ||     ||||||   CC  AG UAGG  AAGGA GUU   CAUAG   CCGG  AAA CG     ACUUUG  A AU  GC  -    CA     U   AAC     UCU    CC   C  AGUAA      CG |
Stem-loop sequence | GGUAUCCAUCCCUUCCUCUAAAAAGUGUCGGCUCUUUUAGCGGUGAAGCUAAAGCGUUUCAAAUGAGCCAAACCGGCCUCUGAUACCAAUUGUAGGAAACGGAUGACGCCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT016820.1 |
|
1.5 | Zea mays clone Contig653 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU943181.1 |
|
1.5 | Zea mays clone 1580698 mRNA sequence | NA | coding protein | psRNATarget |