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BaseInfo

ncRNA ID	novel_zma_miR12108
Species	Zea mays
Class	miRNA
Genome position	Chr9:126010716-126010801 [+]
Reference genome	RefGen_v4
Source	SRR5105959
Length	24
Mature sequence(if miRNA)	1 - UCAUCCCUUGUAUGCCACUGGCCC - 24
Stem-loop(if miRNA)	--           A         CCCCACA    AUAGACACCA   UCAUCCCUUGU UGCCACUGG       UGUC          A   ||||||||||| |||||||||       ||||          A   AGUAGGGAACA ACGGUGACU       GUAU          A UG           C         ---CACC    AUCCAUAUUA
Stem-loop sequence	UCAUCCCUUGUAUGCCACUGGCCCCACAUGUCAUAGACACCAAAAAUUAUACCUAUAUGCCACUCAGUGGCACACAAGGGAUGAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU975854.1	ncRNA:24   CCCGGUCACCGUAUGUUCCCUACU   1   ||||||||||||*||||||||||| targets:711   GGGCCAGUGGCACACAAGGGAUGA   734 Target Full Sequence	1.5	Zea mays clone 503152 chaperone protein dnaJ mRNA, complete cds	NA	coding protein	psRNATarget
BT085283.1	ncRNA:24   CCCGGUCACCGUAUGUUCCCUACU   1   ||||||||||||*||||||||||| targets:964   GGGCCAGUGGCACACAAGGGAUGA   987 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0360M07 mRNA, complete cds	NA	coding protein	psRNATarget
EU956996.1	ncRNA:24   CCCGGUCACCGUAUGUUCCCUACU   1   |||||||||||||||||||*|||| targets:1626   GGGCCAGUGGCAUACAAGGAAUGA   1649 Target Full Sequence	1.5	Zea mays clone 1579828 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU942982.1	ncRNA:24   CCCGGUCACCGUAUGUUCCCUACU   1   |||||||||*|||||||||*|||| targets:96   GGGCCAGUGSCAUACAAGGAAUGA   119 Target Full Sequence	2.5	Zea mays clone 1548806 mRNA sequence	NA	coding protein	psRNATarget
EU967272.1	ncRNA:24   CCCGGUCACCGUAUGUUCCCUACU   1   |||=|||||||||||||||*|||| targets:601   GGGUCAGUGGCAUACAAGGAAUGA   624 Target Full Sequence	1.5	Zea mays clone 300934 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU967272.1	ncRNA:24   CCCGGUCACCGUAUGUUCCCUACU   1   ***||||||||||||||||*|||| targets:631   UUUCCAGUGGCAUACAAGGAAUGA   654 Target Full Sequence	1.5	Zea mays clone 300934 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EZ099368.1	ncRNA:23   CCG-GUCACCGUAUGUUCCCUACU   1   *||-||||||||*||||||||||| targets:1   CGCUCAGUGGCACACAAGGGAUGA   24 Target Full Sequence	1.5	TSA: Zea mays contig35023, mRNA sequence	NA	coding protein	psRNATarget