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BaseInfo

ncRNA ID novel_zma_miR12104
Species Zea mays
Class miRNA
Genome position Chr8:33316847-33316892 [-]
Reference genome RefGen_v4
Source SRR5105959
Length 21
Mature sequence(if miRNA) 26 - UCUAAAACCGCUUGUGAUAGA - 46
Stem-loop(if miRNA) --U                 AGA
   CUAAAACCGCUUGUGAU   C
   |||||||||||||||||
   GAUUUUGGCGGAUACUA   A
AUC                 CAC
Stem-loop sequence UCUAAAACCGCUUGUGAUAGACACACAUCAUAGGCGGUUUUAGCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU948659.1
ncRNA:21   AGAUAGUGUUCGCCAAAAUCU   1
  **||||||||||||||||*|*
targets:752   AGUAUCACAAGCGGUUUUUGU   772

2.5 Zea mays clone 381522 mRNA sequence NA coding protein psRNATarget
BT088393.1
ncRNA:21   AGAUAGUGUUCGCCAAAAUCU   1
  **||||||||||||||||*|*
targets:2109   AGUAUCACAAGCGGUUUUUGU   2129

2.5 Zea mays full-length cDNA clone ZM_BFc0172I22 mRNA, complete cds NA coding protein psRNATarget
NM_001196988.1
ncRNA:21   AGAUAGUGUUCGCCAAAAUCU   1
  **||||||||||||||||*|*
targets:2109   AGUAUCACAAGCGGUUUUUGU   2129

2.5 Zea mays hypothetical protein (LOC100502510), mRNA NA coding protein psRNATarget