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BaseInfo

ncRNA ID novel_zma_miR12102
Species Zea mays
Class miRNA
Genome position Chr1:183685539-183685618 [+]
Reference genome RefGen_v4
Source SRR1997865;SRR1997866
Length 24
Mature sequence(if miRNA) 57 - ACAUUAGGGUAGGAUACAAGAUGA - 80
Stem-loop(if miRNA) --    -      GU   GUU    -ACUAU   U  C  A
  AUCU GUAUCC  CCU   UGUA      UCG AU CG U
  |||| ||||||  |||   ||||      ||| || ||
  UAGA CAUAGG  GGG   ACAU      AGC UA GC C
AG    A      AU   AUU    AAAGUU   U  U  U
Stem-loop sequence AUCUGUAUCCGUCCUGUUUGUAACUAUUCGUAUCCGAUCUCGUAUUCGAUUGAAAUACAUUAGGGUAGGAUACAAGAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008647099.2
ncRNA:24   AGUAGAACAUAGGAUGGGAUUACA   1
  |||||*||||||||||||||||||
targets:1653   UCAUCCUGUAUCCUACCCUAAUGU   1676

1.0 PREDICTED: Zea mays uncharacterized protein (LOC103626711), mRNA NA coding protein psRNATarget
XM_008675942.2
ncRNA:24   AGUAGAACAUAGGAUGGGAUUACA   1
  ||||*|||||||||||||||||||
targets:5659   UCAUAUUGUAUCCUACCCUAAUGU   5682

0.0 PREDICTED: Zea mays uncharacterized LOC103650349 (LOC103650349), mRNA NA coding protein psRNATarget