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BaseInfo

ncRNA ID	novel_zma_miR12099
Species	Zea mays
Class	miRNA
Genome position	Chr8:103314194-103314288 [-]
Reference genome	RefGen_v4
Source	SRR5105959
Length	21
Mature sequence(if miRNA)	1 - CCUUCGGUUUUGUGGCUUCCA - 21
Stem-loop(if miRNA)	--      -    UAA    U A        AAU           GAA   GGAGUC CAAA   CGGA G GAUUGGAG   CUAAAAUUCUU   U   |||||| ||||   |||| | ||||||||   |||||||||||   A   CUUCGG GUUU   GCUU C CUAAUCUC   GAUUUUAGGGG   A AC      U    -UG    C C        CCC           AGG
Stem-loop sequence	GGAGUCCAAAUAACGGAUGAGAUUGGAGAAUCUAAAAUUCUUGAAUAAGGAGGGGAUUUUAGCCCCUCUAAUCCCCUUCGGUUUUGUGGCUUCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ081804.1	ncRNA:21   ACCUUCGGUGUUUUGGCUUCC   1   |||=||||||||*|||||||| targets:3   UGGGAGCCACAAUACCGAAGG   23 Target Full Sequence	2.5	TSA: Zea mays contig17445, mRNA sequence	NA	coding protein	psRNATarget
XM_008662350.2	ncRNA:21   ACCUUCGGUGUUUUGGCUUCC   1   ||*||||||||||||||=||| targets:5209   UGAAAGCCACAAAACCGGAGG   5229 Target Full Sequence	2.5	PREDICTED: Zea mays paramyosin (LOC103639615), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020537662.1	ncRNA:21   ACCUUCGGUGUUUUGGCUUCC   1   |||=|||||||||||||||*| targets:11599   UGGGAGCCACAAAACCGAAAG   11619 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100381565 (LOC100381565), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020543912.1	ncRNA:21   ACCUUCGGUGUUUUGGCUUCC   1   |**=||||||||||||||||| targets:4051   UAAGAGCCACAAAACCGAAGG   4071 Target Full Sequence	2.0	PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA	NA	coding protein	psRNATarget