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BaseInfo

ncRNA ID	novel_zma_miR12095
Species	Zea mays
Class	miRNA
Genome position	Chr8:127173974-127174070 [-]
Reference genome	RefGen_v4
Source	SRR5105959
Length	24
Mature sequence(if miRNA)	1 - UAGCCUAUGGCGCCGAGCUCUGAC - 24
Stem-loop(if miRNA)	--  A      A                        -----  G     UA   CG AGCUCG CGCCAUAGGCUAUGGCGCCGAGCU     AU UUGGC  U   || |||||| ||||||||||||||||||||||||     || |||||   GU UCGAGC GCGGUAUCCGAUACCGUGGCUCGA     UG AGCCG  A CA  C      C                        CACAA  G     CG
Stem-loop sequence	CGAAGCUCGACGCCAUAGGCUAUGGCGCCGAGCUAUGUUGGCUAUAGCGCCGAGGUAACACAGCUCGGUGCCAUAGCCUAUGGCGCCGAGCUCUGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI402936.1	ncRNA:24   CA--GUCUCGAGCCGCGGUAUCCGAU   1   ||--||*||||||||||||||||||| targets:25   GUAACACAGCUCGGCGCCAUAGGCUA   50 Target Full Sequence	0.0	Sequence 1061 from Patent EP2074227	NA	coding protein	psRNATarget
JB163397.1	ncRNA:24   CA--GUCUCGAGCCGCGGUAUCCGAU   1   ||--||*||||||||||||||||||| targets:25   GUAACACAGCUCGGCGCCAUAGGCUA   50 Target Full Sequence	0.0	Sequence 1061 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235066.1	ncRNA:24   CA--GUCUCGAGCCGCGGUAUCCGAU   1   ||--||*||||||||||||||||||| targets:25   GUAACACAGCUCGGCGCCAUAGGCUA   50 Target Full Sequence	0.0	Sequence 1061 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020541199.1	ncRNA:24   CA--GUCUCGAGCCGCGGUAUCCGAU   1   ||--||*||||||||||||||||||| targets:35   GUAACACAGCUCGGCGCCAUAGGCUA   60 Target Full Sequence	0.0	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:24   CA--GUCUCGAGCCGCGGUAUCCGAU   1   ||--||*||||||||||||||||||| targets:33   GUAACACAGCUCGGCGCCAUAGGCUA   58 Target Full Sequence	0.0	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:24   CA--GUCUCGAGCCGCGGUAUCCGAU   1   ||--||*||||||||||||||||||| targets:93   GUAACACAGCUCGGCGCCAUAGGCUA   118 Target Full Sequence	0.0	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:24   CA--GUCUCGAGCCGCGGUAUCCGAU   1   ||--||*||||||||||||||||||| targets:93   GUAACACAGCUCGGCGCCAUAGGCUA   118 Target Full Sequence	0.0	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001137355.1	ncRNA:24   CAGUCUCGAGCCGCGGUAUCCGAU   1   **||*||||||||||||||||||| targets:675   AACACAGCUCGGCGCCAUAGGCUA   698 Target Full Sequence	0.0	Zea mays SAUR56-auxin-responsive SAUR family member (LOC100191931), mRNA	NA	coding protein	psRNATarget
NM_001137355.1	ncRNA:24   CAGUCUCGAGCCGCGGUAUCCGAU   1   **|***|||||||||||||||||| targets:639   CCCUUUGCUCGGCGCCAUAGGCUA   662 Target Full Sequence	1.0	Zea mays SAUR56-auxin-responsive SAUR family member (LOC100191931), mRNA	NA	coding protein	psRNATarget
BT034188.1	ncRNA:24   CAGUCUCGAGCCGCGGUAUCCGAU   1   **||*||||||||||||||||||| targets:675   AACACAGCUCGGCGCCAUAGGCUA   698 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0029I19 mRNA, complete cds	NA	coding protein	psRNATarget
BT034188.1	ncRNA:24   CAGUCUCGAGCCGCGGUAUCCGAU   1   **|***|||||||||||||||||| targets:639   CCCUUUGCUCGGCGCCAUAGGCUA   662 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0029I19 mRNA, complete cds	NA	coding protein	psRNATarget