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BaseInfo

ncRNA ID	novel_zma_miR12092
Species	Zea mays
Class	miRNA
Genome position	Chr8:169206609-169206681 [-]
Reference genome	RefGen_v4
Source	SRR5105959
Length	21
Mature sequence(if miRNA)	1 - UUUAGCCCCUCCAAUCCACUC - 21
Stem-loop(if miRNA)	--GAU         A          A         C      GAUUGGAGG GCUAAAAUCC CUCCUUAUU A      ||||||||| |||||||||| ||||||||| A      CUAACCUCC CGAUUUUAGG GAGGAAUAA U CUCAC         C          G         A
Stem-loop sequence	GAUGAUUGGAGGAGCUAAAAUCCACUCCUUAUUCAAUAAAUAAGGAGGGGAUUUUAGCCCCUCCAAUCCACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU944975.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   |||||||||||||||||||=| targets:748   GAGUGGAUUGGAGGGGCUAGA   768 Target Full Sequence	1.5	Zea mays clone 236700 mRNA sequence	NA	coding protein	psRNATarget
LQ238903.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   |||*||||||||||||||||| targets:11   GAGGGGAUUGGAGGGGCUAAA   31 Target Full Sequence	1.0	Sequence 4898 from Patent EP2985353	NA	coding protein	psRNATarget
JB167234.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   |||*||||||||||||||||| targets:11   GAGGGGAUUGGAGGGGCUAAA   31 Target Full Sequence	1.0	Sequence 4898 from Patent EP2559767	NA	coding protein	psRNATarget
HI406773.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   |||*||||||||||||||||| targets:11   GAGGGGAUUGGAGGGGCUAAA   31 Target Full Sequence	1.0	Sequence 4898 from Patent EP2074227	NA	coding protein	psRNATarget
AY109096.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   |||*||||||||||||||||| targets:2217   GAGGGGAUUGGAGGGGCUAAA   2237 Target Full Sequence	1.0	Zea mays PCO119715 mRNA sequence	NA	coding protein	psRNATarget
XM_020550478.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   |||*||||||||||||||||| targets:2105   GAGAGGAUUGGAGGGGCUAAA   2125 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103651221 (LOC103651221), mRNA	NA	coding protein	psRNATarget
XM_020543912.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   *||*||||||||||||||||| targets:4068   AAGGGGAUUGGAGGGGCUAAA   4088 Target Full Sequence	1.0	PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA	NA	coding protein	psRNATarget
XM_008651784.2	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   |||*|||||*||||||||||| targets:676   GAGGGGAUUAGAGGGGCUAAA   696 Target Full Sequence	2.5	PREDICTED: Zea mays probable E3 ubiquitin-protein ligase HIP1 (LOC103630734), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_008651781.2	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   |||*|||||*||||||||||| targets:676   GAGGGGAUUAGAGGGGCUAAA   696 Target Full Sequence	2.5	PREDICTED: Zea mays probable E3 ubiquitin-protein ligase HIP1 (LOC103630734), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008651780.2	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   |||*|||||*||||||||||| targets:676   GAGGGGAUUAGAGGGGCUAAA   696 Target Full Sequence	2.5	PREDICTED: Zea mays probable E3 ubiquitin-protein ligase HIP1 (LOC103630734), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008651782.2	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   |||*|||||*||||||||||| targets:676   GAGGGGAUUAGAGGGGCUAAA   696 Target Full Sequence	2.5	PREDICTED: Zea mays probable E3 ubiquitin-protein ligase HIP1 (LOC103630734), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EZ062925.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   *||*||||||*|||||||||| targets:109   AAGGGGAUUGAAGGGGCUAAA   129 Target Full Sequence	2.5	TSA: Zea mays contig64047, mRNA sequence	NA	coding protein	psRNATarget
XM_008667867.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   *||*|||||||||||*||||| targets:972   AAGGGGAUUGGAGGGACUAAA   992 Target Full Sequence	2.5	PREDICTED: Zea mays 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (LOC103644703), mRNA	NA	coding protein	psRNATarget
XM_020541991.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   *|||*|||||*|||||||||| targets:2206   AAGUUGAUUGAAGGGGCUAAA   2226 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100275614 (LOC100275614), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020541990.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   *|||*|||||*|||||||||| targets:2489   AAGUUGAUUGAAGGGGCUAAA   2509 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100275614 (LOC100275614), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541989.1	ncRNA:21   CUCACCUAACCUCCCCGAUUU   1   *|||*|||||*|||||||||| targets:2511   AAGUUGAUUGAAGGGGCUAAA   2531 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100275614 (LOC100275614), transcript variant X1, mRNA	NA	coding protein	psRNATarget