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BaseInfo

ncRNA ID novel_zma_miR12079
Species Zea mays
Class miRNA
Genome position Chr1:252885708-252885750 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 22
Mature sequence(if miRNA) 22 - GAGAUGAAAGAAGUCGCGAGCU - 43
Stem-loop(if miRNA) --            G  G   G
  GAGAUGAAAGAA UC CGA C
  |||||||||||| || ||| U
  UUCUACUUUCUU AG GCU G
AG            -  -   G
Stem-loop sequence GAGAUGAAAGAAGUCGCGAGCUGGUCGGAUUCUUUCAUCUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU940929.1
ncRNA:22   UCGAGCGCUGAAGAAAGUAGAG   1
  ||||||||||||||||||||*|
targets:874   AGCUCGCGACUUCUUUCAUCAC   895

1.5 Zea mays clone 1215420 mRNA sequence NA coding protein psRNATarget
EU940981.1
ncRNA:22   UCGAGCGCUGAAGAAAGUAGAG   1
  ||||||||||||||||||||*|
targets:2718   AGCUCGCGACUUCUUUCAUCAC   2739

1.5 Zea mays clone 1229106 mRNA sequence NA coding protein psRNATarget