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BaseInfo

ncRNA ID	novel_zma_miR12054
Species	Zea mays
Class	miRNA
Genome position	Chr1:254503769-254503837 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	1 - AAACCGAAAACCGAACCGAACUGU - 24
Stem-loop(if miRNA)	--         AC           GU       UUU   AAACCGAAA  CGAACCGAACU  ACCGAAA   C   |||||||||  |||||||||||  |||||||   UUUGGCUUU  GCUUGGCUUGA  UGGCUUU   G UU         -A           --       UUG
Stem-loop sequence	AAACCGAAAACCGAACCGAACUGUACCGAAAUUUCGGUUUUUCGGUAGUUCGGUUCGAUUUCGGUUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008682767.2	ncRNA:24   UGUCAAGCCAAGCCAAAAGCCAAA   1   ||=|||||||||||||||=||||| targets:54   ACGGUUCGGUUCGGUUUUUGGUUU   77 Target Full Sequence	1.5	PREDICTED: Zea mays Nucleotide-diphospho-sugar transferase family protein (cl17019_1), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ062734.1	ncRNA:24   UGUCAAGCCAAGCCAAAAGCCAAA   1   *||||||||*|||||||||||||* targets:125   CCAGUUCGGCUCGGUUUUCGGUUG   148 Target Full Sequence	2.0	TSA: Zea mays contig63856, mRNA sequence	NA	coding protein	psRNATarget
BT083977.2	ncRNA:24   UGUCAAGCCAAGCCAAAAGCCAAA   1   *||||||||*|||||||||||||* targets:117   CCAGUUCGGCUCGGUUUUCGGUUG   140 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0060M24 mRNA, complete cds	NA	coding protein	psRNATarget
BT017577.1	ncRNA:24   UG--UC---AAGCCAAGCCAAAAGCCAAA   1   ||--||---|||||||||||*|||||||| targets:678   ACCGAGCUAUUCGGUUCGGUGUUCGGUUU   706 Target Full Sequence	1.5	Zea mays clone EL01N0427H02.c mRNA sequence	NA	coding protein	psRNATarget